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As good as the Java API is, I need to change the code of some classes in the default API packages (for example java.util.Scanner) for a project I am working on.
Ideally, I would extend the classes I am interested and create my own sub-classes, but the classes I want to extend are declared ‘final’. How do you suggest I do this? Will I get into trouble with the compiler if I customize the source code of these packages?
If you can, you should rather wrap and delegate, as suggested in another answer. See the Adapter Pattern.
But there are of course ways to do this if you really need it.
A straightforward approach is to simply modify the code in downloaded sources and substitute your own version of a jar in the classpath.
Another option is to use aspect-oriented programming techniques, likely with AspectJ to intercept and modify calls as needed.
It might also be possible to hack together a solution using reflection and home-grown classloaders, but it will be painful to code.
All of these are however quite risky if you don’t know what you’re doing. Frequently classes are made final for good reason.
If you tell us more specifically what it is you’re hoping to change, we might be able to provide assistance in avoiding what you currently think you need.