From the Writing R Extensions Manual, I read that
As from R 2.14.0 the preferred location for the Sweave sources is the
subdirectory vignettes of the source packages, but for compatibility
with earlier versions of R, vignette sources will be looked for in
inst/doc if vignettes does not exist.
However, when I create a vignettes subdirectory of the package source, when I run devtools::check() or R CMD check I get a warning for Package vignette(s) without corresponding PDF. If I put the vignette (.Rnw and .pdf) in inst/doc the check completes without complaints. I tried looking in my library at installed packaged and did not see any directories named vignettes. Should I still use the deprecated location?
You put the
.Rnwsources invignettes/as you did, but you missed out a critical step; don’t check the source tree. The expected workflow is to build the source tarball and then check that tarball. Building the tarball will create the vignette PDF.for example will build a source package tarball from the sources in
../foo/pkgcreating the.tar.gzpackage in the current directory with the package name and version appended. Then you runR CMD checkon that source package.If you want your vignette built for you put it in
vignettes/and build the source package. At some future date, R Core may remove the ability to build vignettes frominst/docso go with the advised location now and avoid check the sources directly.