Have a following rewriting rule
RewriteEngine On
RewriteCond %{REQUEST_URI} !/(js|css|images)/
RewriteRule section/([0-9a-zA-Z_-]+)$ /index.php?controller=section&method=index¶m=$1
RewriteRule category/([0-9a-zA-Z_-]+)$ /index.php?controller=category&method=products¶m=$1
RewriteRule ([0-9a-zA-Z_-]+)/([0-9a-zA-Z_-]+)/(.*)$ /index.php?controller=$1&method=$2¶m=$3
RewriteRule ([0-9a-zA-Z_-]+)/([0-9a-zA-Z_-]+)$ /index.php?controller=$1&method=$2
Now, when I call for /js/jquery.js, I get the file fine. But if the file is one folder level deeper, eg. /js/fancybox/jquery.fancybox-1.3.4.pack.js, it doesn’t. It has something to do with section and category rules as everything works fine when I remove those two lines
You need to repeat the condition for each rule, the condition only applies to the immediately following rule. The reason why it works when you remove the 2 section and category rules is because the condition is being applied to the 3rd rule (which is what’s messing you up). You need the condition repeated for each rule: