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Home/ Questions/Q 6673689
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Editorial Team
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Editorial Team
Asked: May 26, 20262026-05-26T03:39:24+00:00 2026-05-26T03:39:24+00:00

I had the same question as asked here: New git repository in root directory

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I had the same question as asked here: New git repository in root directory to subsume an exist repository in a sub-directory

I followed this answer here: New git repository in root directory to subsume an exist repository in a sub-directory

Now, gitk --all shows two histories: one culminating in the current master, and one named original/refs/heads/master.

I don’t know what this second history is, or how to remove it from the repo. I don’t need two histories in my repository.

How do I get rid of it?

To reproduce yourself:

mkdir -p project-root/path/to/module
cd project-root/path/to/module
mkdir dir1 dir2 dir3 
for dir in * ; do touch $dir/source-file-$dir.py ; done
git init
git add .
git commit -m 'Initial commit'

Now we have the original poster’s problem. Let’s move the root of the git repo to project-root using the answer linked above:

git filter-branch --tree-filter 'mkdir -p path/to/module ; git mv dir1 dir2 dir3 path/to/module' HEAD
rm -rf path
cd ../../../ # Now PWD is project-root
mv path/to/module/.git .
git reset --hard

Now, see my current problem:

gitk --all &
git show-ref

How do I get rid of refs/original/heads/master and all associated history?

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1 Answer

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  1. Editorial Team
    Editorial Team
    2026-05-26T03:39:25+00:00Added an answer on May 26, 2026 at 3:39 am

    refs/original/* is there as a backup, in case you mess up your filter-branch. Believe me, it’s a really good idea.

    Once you’ve inspected the results, and you’re very confident that you have what you want, you can remove the backed up ref:

    git update-ref -d refs/original/refs/heads/master
    

    or if you did this to many refs, and you want to wipe it all out:

    git for-each-ref --format="%(refname)" refs/original/ | xargs -n 1 git update-ref -d
    

    (That’s taken directly from the filter-branch manpage.)

    This doesn’t apply to you, but to others who may find this: If you do a filter-branch which removes content taking up significant disk space, you might also want to run git reflog expire --expire=now --all and git gc --prune=now to expire your reflogs and delete the now-unused objects. (Warning: completely, totally irreversible. Be very sure before you do it.)

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