I tried a lot with installing codeigniter in Magento, and I am doubtful now whether it is possible or not. In a critical situation. Is it possible to install codeigniter in Magento ? And can we access codeigniter files through magento? Any links or tutorials for supporting ?
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Since both the framework are in PHP itself, the answer is yes. You can install codeigniter by creating a folder with CI files on it. It works. You can share session variables to control the session in between two systems.
But the question is why exactly do you want to do like so ? If you are trying to access codeigniter libraries for your magento app, then answer is no.
But, if these magento and codeigniter works independently on their own, then its fine.