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I would like to use a directory structure within the R folder for the source code of a package. For example, within my R folder I have an algos folder with functions I want to export and document. However roxygen2 by default does not seem to go through the subfolders of the R folder.
I tried to use the @include keyword as follows for a file at `R/algos/algo1.r’
#' @include algos/algo1.r
but without success. Is there a simple way to use subfolder for the R source code?
Writing R Extensions has this to say (in Section 1.1.5) about subdirectories under the R directory:
Implied in this is that they can’t have other subdirectories other than those two. This is confirmed in an r-devel thread and again later in another r-devel thread.