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In phpmyadmin our main user usually "root" its stored on a DataBase called "mysql" under the "users" table.
My question is, the password under a user, in which format is encrypted? md5? sha1? base64?
This is not really related to phpMyAdmin ; it depends on the MySQL server itself — phpMyAdmin being only the tool you’re using to interrogate MySQL.
Anyway, this section of MySQL’s manual should help you : Password Hashing in MySQL : (quoting) :