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It’s a known fact that jQueryMobile loads pages with ajax and is not including in DOM the header content in every pages.
I need to load a custom js file in some pages, how can I achieve this? Until now I have placed the .js files in the body, but there are some problems with the code there too so it’s not a good workaround. Until I can find a solution I will use the rel="external" workaround, but I really need to find an answer to my question.
You could use some javascript to dynamically add the js file to the DOM.
This is demoed here: http://www.javascriptkit.com/javatutors/loadjavascriptcss.shtml