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Let’s assume that we have command X which can be executed in shell and return some result in stdout and stderr. Is it possible to do this from R or/and Matlab? And if yes, how can the result of command be handled?
you can use the system() command to execute shellscripts, system-commands, etc in R
it’s documented at
http://cran.r-project.org/doc/manuals/R-lang.html#System-and-foreign-language-interfaces