Question

To deploy in GlassFish Server Open Source Edition 3.1.1 (build 12):

Caused by: java.security.PrivilegedActionException:
com.sun.xml.bind.v2.runtime.IllegalAnnotationsException: 1 counts of
IllegalAnnotationExceptions There’s no ObjectFactory with an
@XmlElementDecl for the element
{http://www.w3.org/2004/08/xop/include}Include.
this problem is related to the following location:
at protected java.util.List ru.gosuslugi.smev.rev120315.ReferenceType.content
at ru.gosuslugi.smev.rev120315.ReferenceType
at public javax.xml.bind.JAXBElement ru.gosuslugi.smev.rev120315.ObjectFactory.createReference(ru.gosuslugi.smev.rev120315.ReferenceType)
at ru.gosuslugi.smev.rev120315.ObjectFactory
at protected java.util.List ru.gosuslugi.smev.rev120315.AppDataType.any
at ru.gosuslugi.smev.rev120315.AppDataType
at protected ru.gosuslugi.smev.rev120315.AppDataType ru.gosuslugi.smev.rev120315.MessageDataType.appData
at ru.gosuslugi.smev.rev120315.MessageDataType
at protected ru.gosuslugi.smev.rev120315.MessageDataType
ru.gosuslugi.smev.rev120315.BaseMessageType.messageData
at ru.gosuslugi.smev.rev120315.BaseMessageType

Sources:

src/org/w3/_2004/_08/xop/include/Include.java

//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.4-2 
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a> 
// Any modifications to this file will be lost upon recompilation of the source schema. 
// Generated on: 2012.08.22 at 04:13:30 PM MSK 
//


package org.w3._2004._08.xop.include;

import java.util.ArrayList;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import javax.xml.bind.annotation.XmlAccessType;
import javax.xml.bind.annotation.XmlAccessorType;
import javax.xml.bind.annotation.XmlAnyAttribute;
import javax.xml.bind.annotation.XmlAnyElement;
import javax.xml.bind.annotation.XmlAttribute;
import javax.xml.bind.annotation.XmlSchemaType;
import javax.xml.bind.annotation.XmlType;
import javax.xml.namespace.QName;


/**
 * <p>Java class for Include complex type.
 * 
 * <p>The following schema fragment specifies the expected content contained within this class.
 * 
 * <pre>
 * &lt;complexType name="Include">
 *   &lt;complexContent>
 *     &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
 *       &lt;sequence>
 *         &lt;any namespace='##other' maxOccurs="unbounded" minOccurs="0"/>
 *       &lt;/sequence>
 *       &lt;attribute name="href" use="required" type="{http://www.w3.org/2001/XMLSchema}anyURI" />
 *       &lt;anyAttribute namespace='##other'/>
 *     &lt;/restriction>
 *   &lt;/complexContent>
 * &lt;/complexType>
 * </pre>
 * 
 * 
 */
@XmlAccessorType(XmlAccessType.FIELD)
@XmlType(name = "Include", propOrder = {
    "any"
})
public class Include {

    @XmlAnyElement(lax = true)
    protected List<Object> any;
    @XmlAttribute(name = "href", required = true)
    @XmlSchemaType(name = "anyURI")
    protected String href;
    @XmlAnyAttribute
    private Map<QName, String> otherAttributes = new HashMap<QName, String>();

    /**
     * Gets the value of the any property.
     * 
     * <p>
     * This accessor method returns a reference to the live list,
     * not a snapshot. Therefore any modification you make to the
     * returned list will be present inside the JAXB object.
     * This is why there is not a <CODE>set</CODE> method for the any property.
     * 
     * <p>
     * For example, to add a new item, do as follows:
     * <pre>
     *    getAny().add(newItem);
     * </pre>
     * 
     * 
     * <p>
     * Objects of the following type(s) are allowed in the list
     * {@link Object }
     * 
     * 
     */
    public List<Object> getAny() {
        if (any == null) {
            any = new ArrayList<Object>();
        }
        return this.any;
    }

    /**
     * Gets the value of the href property.
     * 
     * @return
     *     possible object is
     *     {@link String }
     *     
     */
    public String getHref() {
        return href;
    }

    /**
     * Sets the value of the href property.
     * 
     * @param value
     *     allowed object is
     *     {@link String }
     *     
     */
    public void setHref(String value) {
        this.href = value;
    }

    /**
     * Gets a map that contains attributes that aren't bound to any typed property on this class.
     * 
     * <p>
     * the map is keyed by the name of the attribute and 
     * the value is the string value of the attribute.
     * 
     * the map returned by this method is live, and you can add new attribute
     * by updating the map directly. Because of this design, there's no setter.
     * 
     * 
     * @return
     *     always non-null
     */
    public Map<QName, String> getOtherAttributes() {
        return otherAttributes;
    }

}

org/w3/_2004/_08/xop/include/ObjectFactory.java

//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.4-2 
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a> 
// Any modifications to this file will be lost upon recompilation of the source schema. 
// Generated on: 2012.08.22 at 04:13:30 PM MSK 
//


package org.w3._2004._08.xop.include;

import javax.xml.bind.JAXBElement;
import javax.xml.bind.annotation.XmlElementDecl;
import javax.xml.bind.annotation.XmlRegistry;
import javax.xml.namespace.QName;


/**
 * This object contains factory methods for each 
 * Java content interface and Java element interface 
 * generated in the org.w3._2004._08.xop.include package. 
 * <p>An ObjectFactory allows you to programatically 
 * construct new instances of the Java representation 
 * for XML content. The Java representation of XML 
 * content can consist of schema derived interfaces 
 * and classes representing the binding of schema 
 * type definitions, element declarations and model 
 * groups.  Factory methods for each of these are 
 * provided in this class.
 * 
 */
@XmlRegistry
public class ObjectFactory {

    private final static QName _Include_QNAME = new QName("http://www.w3.org/2004/08/xop/include", "Include");

    /**
     * Create a new ObjectFactory that can be used to create new instances of schema derived classes for package: org.w3._2004._08.xop.include
     * 
     */
    public ObjectFactory() {
    }

    /**
     * Create an instance of {@link Include }
     * 
     */
    public Include createInclude() {
        return new Include();
    }

    /**
     * Create an instance of {@link JAXBElement }{@code <}{@link Include }{@code >}}
     * 
     */
    @XmlElementDecl(namespace = "http://www.w3.org/2004/08/xop/include", name = "Include")
    public JAXBElement<Include> createInclude(Include value) {
        return new JAXBElement<Include>(_Include_QNAME, Include.class, null, value);
    }

}

Answer 1

When a JAXB model is generated from an XML schema, I always recommend creating the JAXBContext using the package name of the generated model.

JAXBContext jc = JAXBContext.newInstance("org.w3._2004._08.xop.include");

You don’t specify what kind of application you are deploying to GlassFish, but if it is a JAX-RS/Jersey application I would recommend the use of a ContextResolver. This is a standard mechanism that gives you greater control over how your JAXBContext is created. Below is an example.

import java.util.*;
import javax.ws.rs.Produces;
import javax.ws.rs.ext.*;
import javax.xml.bind.*;
import org.eclipse.persistence.jaxb.JAXBContextFactory;

@Provider
@Produces({"application/xml", "application/json"})
public class SampleContextResolver implements ContextResolver<JAXBContext> {

    private JAXBContext jc;

    public SampleContextResolver() {
        try {
            jc = JAXBContext.newInstance("org.w3._2004._08.xop.include");
        } catch(JAXBException e) {
            throw new RuntimeException(e);
        }
    }

    public JAXBContext getContext(Class<?> clazz) {
        if(clazz.getPackage().getName().equals("org.w3._2004._08.xop.include")) {
            return jc;
        }
        return null;
    }

}