When you publish a website you get xml files of type .compiled. It contains for example:
<?xml version="1.0" encoding="utf-8"?>
<preserve resultType="6" virtualPath="/App_Code/" hash="ffffffffc89f22d3" filehash="" flags="140000" assembly="App_Code" />
What are those files for? Should a deploy them to the server?
According to the MSDN article:
After the precompiled application is deployed, ASP.NET uses the assemblies in the Bin folder to process requests. The precompilation output includes .aspx or .asmx files as placeholders for pages. The placeholder files contain no code. They exist only to provide a way to invoke ASP.NET for a specific page request and so that file permissions can be set to restrict access to the pages.